Board Thread:Questions and Answers/@comment-25129394-20140716101049/@comment-24480380-20140716150854

If I keep seeing this question pop up I'm going to start shooting people in the kneecaps.

There's nothing to suggest that Jubei died. Not in the game, not in Library mode, nowhere. I very strongly doubt that they would just kill Jubei off-screen, without so much as a mention at that. Assume he is alive until proven otherwise.